Gennaro Oliva's Home page :: Pubblications
  • Transcriptional gene network inference from a massive dataset elucidates transcriptome organization and gene function - V. Belcastro, V. Siciliano, F. Gregoretti, P. Mithbaokar, G. Dharmalingam S. Berlingieri, F. Iorio, G. Oliva, R. Polishchuck N. Brunetti-Pierri, D. di Bernardo. - Nucleic Acids Research July 23, 2011. [url]
  • Reverse-Engineering and Analysis of Genome-Wide Gene Regulatory Networks from Gene Expression Profiles Using High-Performance Computing - V. Belcastro, F. Gregoretti, V. Siciliano, M. Santoro, G. D'Angelo, G. Oliva, D. di Bernardo - IEEE/ACM Transactions on Computational Biology and Bioinformatics, Volume 99, 2011, IEEE Computer Society. [url]
  • Parallel Computing Algorithms for Reverse-Engineering and Analysis of Genome-Wide Gene Regulatory Networks from Gene Expression Profiles - V. Belcastro, F. Gregoretti, G. Oliva, D. di Bernardo - 2010 Ninth International Workshop on Parallel and Distributed Methods in Verification, and Second International Workshop on High Performance Computational Systems Biology, IEEE Computer Society, Los Alamitos, CA, USA, 2010 [url]
  • A multi-grained distributed implementation of the parallel Block Conjugate Gradient algorithm - A. Murli, L. D'Amore, G. Laccetti, F. Gregoretti, G. Oliva - Concurrency and Computation: Practice and Experience, doi:10.1002/cpe.1548, John Wiley & Sons, Ltd 2010.
  • A parallel implementation of the network identification by multiple regression (NIR) algorithm to reverse-engineer regulatory gene networks. - F. Gregoretti, V. Belcastro, D. di Bernardo, G. Oliva - PLoS One. 2010. [url]
  • A distributed combustion solver for engine simulations on grids - L. Antonelli, P. Belardini, P. D'Ambra, F. Gregoretti, G. Oliva - Journal of Computational and Applied Mathematics, Volume 226 Issue 2, April, 2009. [url]
  • Production Grids - F. Gregoretti, G. Oliva - Grid Computing Research Progress, Chapter 5, Nova Publishers, ISBN 978-1-60456-404-4, 2008
  • MGF: a grid-enabled MPI library - F. Gregoretti, G. Laccetti, A. Murli, G. Oliva, U. Scafuri - Journal of Future Generation Computer Systems (FGCS), special issue on Grid and MPI, Elsevier Volume 24, Issue 2, February 2008, Pages 158-165. [url]
  • A parallel combustion solver within an operator splitting context for engine simulations on Grids - L. Antonelli, P. D'Ambra, F. Gregoretti, G. Oliva, P. Belardini - Proceedings of the 6th International Conference on Large-Scale Scientific Computations, Lecture Notes in Computer Science, Volume 4818, Springer, 2007.
  • Multi-site Jobs Management System (MJMS): A tool to manage multi-site MPI Applications Execution in Grid Environment - J. Frey, F. Gregoretti, G. Laccetti, A. Murli, G. Oliva - Proceedings of the HPDC'15 Workshop on HPC Grid programming Environments and Components (HPC-GECO/CompFrame), IEEE Computer Society 2006.
  • MGF: a grid-enabled MPI library with a delegating mechanism to improve collective operations - F. Gregoretti, G. Laccetti, A. Murli, G. Oliva, U. Scafuri - Proceedings of the 12th European PVM/MPI Users' Group Meeting (Euro PVM/MPI 2005), Lecture Notes in Computer Science, Springer, 2005.
  • MGF: MPI Globus Forwarder. Un'implementazione di MPI per Grid Computing - F. Gregoretti, G. Laccetti, A. Murli, G. Oliva - Tech Rep. n. TR-ICAR-NA-04-20, November 2004 e Working Note n. 50, WP9 Grid-enabled Scientific Libraries, Progetto FIRB (Grid.it), November 2004.
  • Distributed RPC-based PSE for Medical Imaging applications, High Performance Scientific and Engineering Computing - M.Bertero, P.Bonetto, L.Carracciuolo, L.D'Amore, A.R.Formiconi, M.R.Guarracino, G.Laccetti, A.Murli, G.Oliva - edited by Laurence Tianruo Yang and Yi Pan, p.189, October 2003 Kluwer, Academic Publishers, Boston, ISBN 1-4020-7580-4.
  • MedIGrid: a Medical Imaging environment based on a Grid Computing infrastructure - P.Bonetto, G.Oliva, A.R.Formiconi - 25th Annual International Conference of the IEEE/EMBS, Cancun, Mexico, 17-21 September 2003 CD-ROM/Abstracts Proceedings, IEEE Computer Society 2003, IEEE Catalog Number 03CH37439C, ISBN 0-7803-7790-7
  • MedIGrid: a Medical Imaging application for computational Grids - M. Bertero, P. Bonetto, L. Carracciuolo, L. D'Amore, A. Formiconi, M.R. Guarracino, G. Laccetti, A. Murli, G. Oliva - Workshop on Parallel and Distributed Scientific and Engineering Computing with Applications (PDSECA-03), in conjunction with The 17th International Parallel and Distributed Processing Symposium (IPDPS-2003), April 22-26, 2003, Nice Acropolis Convention Center, Nice, France CD-ROM/Abstracts Proceedings, IEEE Computer Society 2003, ISBN 0-7695-1926-1
  • A Grid application for medical imaging - L. D'Amore, A. Formiconi, M.R. Guarracino, A. Murli, G. Oliva - SIMAI 2002, Cagliari, 2002
  • Some perspective on remote visualization on Grid - M.R. Guarracino, G. Laccetti, G. Oliva, D. Romano - First Euroglobus Workshop, Marina d'Ugento (LE), 2001
  • Remote Rendering in Grid Computing Environment - M.R. Guarracino, G. Laccetti, G. Oliva, D. Romano - CPS-CNR TR-01-7, 2001
  • Applicazioni ad Alte Prestazioni per Piattaforme Grid - R. Baraglia, R. Ferrini, M.R. Guarracino, G. Laccetti, D. Laforenza, A. Laganà, G. Oliva, S. Orlando, P. Palmerini, R. Perego, D. Romano - ASI-PQE2000 Programme, Del. WP5.001, May 2001
  • Yabat: An Administration and Monitoring Software for Beowulf Clusters - M.R. Guarracino, G. Laccetti, G. Oliva, U. Scafuri - Proceedings of IEEE International Conference on Cluster Computing, Chemitz, 2000

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